Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1135 150 3e-31 >seq1135 Length=474297 Score = 150 bits (166), Expect = 3e-31 Identities = 136/171 (80%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| |||| |||||||||||||| ||||| |||||||| ||||| | || ||| | Sbjct 61630 GATAGCAGGAGCTTTATGGTGGTACTACATATCAAAAGGGATTGAATATCTGGACACAAT 61689 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 || ||||| || || || || |||||||| | || ||||| || || ||||| ||||| Sbjct 61690 ATTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGTTTTCTTCATGTCTATCACCATTT 61749 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 ||||||||||||||| | ||| | || || |||||| |||||||||| || Sbjct 61750 CACTATGTTTACTTTATGGTGGATTGGCATCAAATGGGTTGCAGGAGGACA 61800 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728 ||| || |||||| | |||| || || ||||| ||||| ||||| || |||||||| || Sbjct 65442 GGTTCAGTTCCATGTGACTATTGGCCACACCGCCATGTCTATTTATATTGATTGCCCCTT 65501 Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788 ||| ||||||| ||| ||| || || ||||| || ||||||| | ||||||| Sbjct 65502 TCCTAAATGGATGCACTGGGGTGTCATTTTCTATGCTGCCTCTTTTATTGTTCTGTTTGG 65561 Query 58789 TAACTTCTATTTTAGAACATACAAGA 58814 ||||||||| | | | |||||||||| Sbjct 65562 TAACTTCTACTATCGGACATACAAGA 65587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 900064072796640