Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq18400 197 2e-44 seq9062 179 5e-39 seq2001 170 3e-36 seq4627 107 3e-17 seq1416 93.3 6e-13 >seq18400 Length=2326 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 1809 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 1756 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 1755 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGCCGAGGCTTCCCGC 1696 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | || ||||||||||| ||||||||| Sbjct 1695 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGCGC 1636 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1635 CTCCTCCTGCCCGGCGAACTGGCCAAGCACGCCGTCTCCGAGGGCACCA 1587 >seq9062 Length=25048 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 8546 TACAAGGTGCTGAAGCAGGTCCACCCCGATACCGG-----CATC-TCTTCCAAGGCCATG 8599 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 8600 AGTATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGCCGAGGCTTCCCGC 8659 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | |||||||||||||| ||||| ||| Sbjct 8660 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCCGCGAGATCCAGACGGCCGTTCGC 8719 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||||||||||||| |||| Sbjct 8720 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGGACCA 8768 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 20623 TACAAGGTGCTGAAGCAGGTCCACCCCGATACCGG-----CATC-TCTTCCAAGGCCATG 20676 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 20677 AGTATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGCCGAGGCTTCCCGC 20736 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | |||||||||||||| ||||| ||| Sbjct 20737 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCCGCGAGATCCAGACGGCCGTTCGC 20796 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||||||||||||| |||| Sbjct 20797 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGGACCA 20845 >seq2001 Length=193380 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| || || |||| ||| |||| ||||| Sbjct 168896 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCATG 168843 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||| ||| Sbjct 168842 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCCCGC 168783 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | || ||||||||||| ||||||||| Sbjct 168782 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCTCGGGAGATCCAGACGGCCGTGCGC 168723 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||||||||||| ||||||||| || || ||||||| Sbjct 168722 CTCCTGCTGCCCGGCGAACTGGCCAAGCACGCCGTGTCGGAAGGCACCA 168674 >seq4627 Length=64116 Score = 107 bits (118), Expect = 3e-17 Identities = 108/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| ||||| | | | | || | ||||| || |||||||||||| ||||| Sbjct 18857 CAGCTCTGGTACGCCATCATTGAGTCGCAGACGGAGACGGGGACGCCCTACATGCTCTAC 18798 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAA 262209 |||||| || ||||| || ||||||||||||||||||||||||| | || | ||| Sbjct 18797 AAGGACTCCTGCAACCGGAAGAGCAACCAGCAGAACCTGGGCACCATCA-AGTGCAGCAA 18739 Query 262210 CCTGTGCACCGAGATCGT 262227 ||| ||||||||||| || Sbjct 18738 CCTCTGCACCGAGATTGT 18721 Score = 87.8 bits (96), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || || |||||||| ||| |||||||||||||| |||||||| ||||| Sbjct 24796 TGCTTCCTCCTGTGCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGCAC 24737 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||| |||||||||||| | || || || ||||| | |||| Sbjct 24736 TGCGCACTCATCTCCAAGTCCGCGGGGGGAATCGGGGTGGCCG 24694 >seq1416 Length=401889 Score = 93.3 bits (102), Expect = 6e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1813105 GCGGTTAAAGCCGTGCCGCGTGACGGCCACCACTGAGCCGCGGCAACACATGGTGTCGGT 1813164 |||||| | |||||||||||||| ||||| || ||||| || |||||||||| Sbjct 338547 GCGGTTGACGCCGTGCCGCGTGATGGCCATCAAATGCCCGCGACAGGTCATGGTGTCGCA 338488 Query 1813165 GGCCAGCGCAAAGTGGCGGTCGTTGACATAGGTGCCGTCAAAGGAGATCAC 1813215 | ||| || |||||||||| |||||| |||| |||||| |||||||| || Sbjct 338487 GAGCAGGGCCAAGTGGCGGTAGTTGACGTAGGAGCCGTCGAAGGAGATGAC 338437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7149222971668638