Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11]
296,399 sequences; 1,594,074,654 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1703 109 4e-19
seq2566 107 2e-18
seq22 98.7 8e-16
>seq1703
Length=211135
Score = 109 bits (120), Expect = 4e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108
||||| || || || || ||| | || ||||||||| ||| ||||||||||| ||
Sbjct 100812 ATGGCTTTACCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGTGAACTCTCT 100753
Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168
||||| |||||||| | || || ||||||||||| || || || || |||||||| |||
Sbjct 100752 TGTCAGTTGTATCAGCGTTCTGGAGACATGGGACTGGGAGTACCTTTCAACATAGCTAGT 100693
Query 41169 TATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
|| | || || || | |||||||| || |||||
Sbjct 100692 TACTCACTTCTTACTTCAATGATTGCCCATGTTAC 100658
>seq2566
Length=113286
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|| ||||| | || || ||||| | || ||||| || |||||||| || || ||||||
Sbjct 13056 GGCGAACGTGTAGTAGCATTTGCTGCAGTTGAAGGAATCTTCTTTTCTGGCTCTTTTGCG 13115
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| ||||||||| | |||||||||||| | ||||||||| | || ||||| |||||| |
Sbjct 13116 TCAATATTTTGGCTGAAGAAACGAGGTCTAATGCCTGGGCTTACTTTTTCTAATGAGCTG 13175
Query 44243 ATAAGTCGTGATGA 44256
|| ||| | |||||
Sbjct 13176 ATCAGTAGAGATGA 13189
Score = 105 bits (116), Expect = 5e-18
Identities = 73/83 (88%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | ||||| |||||||| |||||||| |||||||||||||| |||||| |||||
Sbjct 8194 TTTGTCATTTTTCCTATTCAATACCATGACATCTGGCAAATGTACAAGAAAGCAGAGGCG 8253
Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782
||||| |||||||| ||||| ||
Sbjct 8254 TCATTCTGGACAGCTGAAGAGGT 8276
Score = 89.7 bits (98), Expect = 4e-13
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554
|| || ||||| |||||||| ||||| || |||||||||| || || || ||||||||
Sbjct 14577 AATCCATTTGACTTTATGGAGAATATCTCTCTGGAAGGCAAGACTAATTTCTTTGAAAAG 14636
Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAGTGACAATAA---ATTTACT 44611
|| || ||||||||||| | ||||| || ||| | || |||| |||||||
Sbjct 14637 CGTGTAGGAGAATATCAAAGGATGGGTGTGATGTCACGTCCTGCAGATAACGCATTTACT 14696
Query 44612 ACGGATGAAGATTTCTAA 44629
||||| ||||||||||
Sbjct 14697 TTGGATGCAGATTTCTAA 14714
>seq22
Length=1337131
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
|||||||| ||| | |||||||| || ||||| ||||| || || || | |||||||||
Sbjct 642747 CAAGAAGTGCAAATCCCAGAAGCTCGTTGTTTCTATGGCTTCCAGATATCAATAGAAAAT 642688
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019
||||||| || ||||||||| | | ||||| || |||||||||||
Sbjct 642687 GTTCATTCTGAGATGTACAGTTTGTTAATAGACACTTACATCAAAGA 642641
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|| ||| || | || |||||||| | ||| |||||||| |||||||| || | |||||
Sbjct 639845 GGTGAAAGAGTGGTTGCGTTTGCTGCTGTAGAAGGCATCTTCTTTTCTGGTGCTTTTGCA 639786
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
|||||||||||| | ||||| |||| || ||||| || | || || || || || |
Sbjct 639785 GCCATATTTTGGCTCAAGAAGAGAGGGTTAATGCCAGGCCTTACTTTCTCCAACGAACTT 639726
Query 44243 ATAAGTCGTGATGAAG 44258
|| || | |||||||
Sbjct 639725 ATTAGCAGAGATGAAG 639710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396020244725995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |