Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11]
296,399 sequences; 1,594,074,654 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7643 156 1e-32
>seq7643
Length=26413
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||| ||||| ||||| || || |||| ||||| |||| | || | |||||
Sbjct 24570 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 24511
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| ||||| ||||| || | |||||||| || ||||| |||||||||||
Sbjct 24510 TTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTC 24451
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||||||| || ||||| || | ||||| |||| ||||| ||
Sbjct 24450 CTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACCTCTAGGGTGATGGT 24391
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| |||||||| || | || | ||||||||
Sbjct 24390 CTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355
Score = 131 bits (144), Expect = 4e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||||||||||||||| || || |||| ||||| || | | || | |||||
Sbjct 24798 CAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATC 24739
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|||||||||||| ||||| ||||| | | || || || || ||||| |||||||||||
Sbjct 24738 TTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 24679
Query 225621 TTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
|||||| ||| || || || || |||||||| || ||||| || | ||||| |
Sbjct 24678 TTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 24620
Query 225680 TCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||| || || || || || | ||| | |||||
Sbjct 24619 TCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586
Score = 100 bits (110), Expect = 7e-16
Identities = 148/213 (69%), Gaps = 14/213 (7%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||||||||| |||||||| || |||| ||||| || | | || | |||||
Sbjct 25012 CAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 24953
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | |||||||| || |||
Sbjct 24952 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCTGGAGGA-------------- 24907
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||||||| || |||||||| || ||||| || | ||||| ||
Sbjct 24906 NTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 24847
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || || | ||| | |||||
Sbjct 24846 CTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 24814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1188002428980906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |