Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7643 156 1e-32 >seq7643 Length=26413 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 24570 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 24511 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||| ||||| || | |||||||| || ||||| ||||||||||| Sbjct 24510 TTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTC 24451 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| || ||||| || | ||||| |||| ||||| || Sbjct 24450 CTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACCTCTAGGGTGATGGT 24391 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| |||||||| || | || | |||||||| Sbjct 24390 CTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355 Score = 131 bits (144), Expect = 4e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||||||||||||||| || || |||| ||||| || | | || | ||||| Sbjct 24798 CAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATC 24739 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 |||||||||||| ||||| ||||| | | || || || || ||||| ||||||||||| Sbjct 24738 TTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 24679 Query 225621 TTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679 |||||| ||| || || || || |||||||| || ||||| || | ||||| | Sbjct 24678 TTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 24620 Query 225680 TCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| || || || || || | ||| | ||||| Sbjct 24619 TCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 100 bits (110), Expect = 7e-16 Identities = 148/213 (69%), Gaps = 14/213 (7%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||||||||| |||||||| || |||| ||||| || | | || | ||||| Sbjct 25012 CAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 24953 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | |||||||| || ||| Sbjct 24952 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCTGGAGGA-------------- 24907 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| || |||||||| || ||||| || | ||||| || Sbjct 24906 NTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 24847 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || || | ||| | ||||| Sbjct 24846 CTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 24814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188002428980906