Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq22 129 5e-25 seq2566 107 2e-18 >seq22 Length=1337131 Score = 129 bits (142), Expect = 5e-25 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 |||| ||||||||||| |||||||| || || || | || |||||||| |||||||| | Sbjct 639710 CTTCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 639769 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | ||||||||||| || ||||| | ||||||||||| ||||||||||| || ||||||| Sbjct 639770 TGAGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACG 639829 Query 4690 CTAC 4693 | || Sbjct 639830 CAAC 639833 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 4790 TAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 ||||| ||||| ||| ||||||| || ||||||||||||| | || ||||| || Sbjct 642622 TAATTACCTTTTCTCA---GGGTCTTTGATGTAAGTGTCTATTAACAAACTGTACATCTC 642678 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 |||||| | ||||||||| | ||||| || || || || || | |||||||| | ||| Sbjct 642679 AGAATGAACATTTTCTATTGATATCTGGAAGCCATAGAAACAACGAGCTTCTGGGATTTG 642738 Query 4910 AACTTCGTTACAAAATCTTTCTAC 4933 ||||| | | ||| | |||||| Sbjct 642739 CACTTCTTGGCTAAAACGTTCTAC 642762 >seq2566 Length=113286 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||| || ||||| || |||||||| || | || ||||||| ||||| || || Sbjct 13189 TCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCTTC 13130 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||||||||| | ||||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 13129 AGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 13070 Query 4692 ACTA 4695 |||| Sbjct 13069 ACTA 13066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425506941905867