Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq22 120 4e-22 seq2566 116 5e-21 >seq22 Length=1337131 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| ||||| | |||||| || || || || || ||||||| || | ||| | Sbjct 639710 CTTCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 639769 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 ||||||||||||| || || |||| ||||||||||| |||||||||||||| || || | Sbjct 639770 TGAGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACG 639829 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 639830 CAACCACTCTTTCACC 639845 >seq2566 Length=113286 Score = 116 bits (128), Expect = 5e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||||||| || | || |||||||| || |||||||||||||| || || || || Sbjct 13189 TCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCTTC 13130 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||||||||| | ||| ||||| ||||||||||| || ||||| || || || ||||| Sbjct 13129 AGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 13070 Query 46774 AC 46775 || Sbjct 13069 AC 13068 Score = 96.9 bits (106), Expect = 5e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGA 47187 || |||||||||||||||||||||||||||||||| || ||||| | ||| || ||| | Sbjct 8276 ACCTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGG 8217 Query 47188 TATTGGATCGGAAAAATAACAAA 47210 ||||| || |||||||| ||||| Sbjct 8216 TATTGAATAGGAAAAATGACAAA 8194 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 46549 TGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGC 46608 || || || |||||||||| | || ||| ||||| |||||||| ||||| ||| Sbjct 13553 TGCTCTATTGTGACAGCATTTGTGATGATCTCCCTTACTTTTTCCTCAGTTGGTTTGTGC 13494 Query 46609 ATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCC 46652 | ||||||||| ||||||| ||| |||||||||||||| | ||| Sbjct 13493 ACCAAATGTTTGAACATTAGACAAGCAAAATCACAATGCAAGCC 13450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710292986959680