Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7643 122 2e-22 >seq7643 Length=26413 Score = 122 bits (134), Expect = 2e-22 Identities = 159/217 (73%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| || | | || | |||||| Sbjct 24797 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCT 24738 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || || ||||| | ||||||||| || | | || |||||||| | Sbjct 24737 TCTAGCTGCTTT--CCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGT 24680 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| ||||| |||||| |||| | | |||| ||| ||| || || || || | Sbjct 24679 CTTGGATTTTGGCTTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGA 24623 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || | ||||||||||||| |||||| Sbjct 24622 TGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 118 bits (130), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 24569 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 24510 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| |||||||| ||||| | | || |||||||| | Sbjct 24509 TCCAGCTGCTTT--CCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGT 24452 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 | || || || || ||| |||| | | | || ||| ||| || || || || | Sbjct 24451 CCTGGATCTTGGCCTTCACATTCTCAATGGTATC---ACTTGGCTCCACCTCTAGGGTGA 24395 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || ||||| || | ||||||||| |||| ||||||||| Sbjct 24394 TGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149439036067729