Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2566 107 2e-18 seq22 89.7 5e-13 >seq2566 Length=113286 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| |||| ||||||||||| || | || ||||||| |||||||| || Sbjct 13189 TCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCTTC 13130 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| ||||| || || |||||||| || || ||||| || ||||| || Sbjct 13129 AGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 13070 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 13069 ACTACACGT 13061 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/142 (75%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 23159 TTTAAAAATCTTCATCTAAAGTGAAT---TTCACTGCTTTATCACTATTCATAACACCCA 23215 |||| |||||| |||| ||||| ||| || |||| | || ||| ||||||| Sbjct 14715 TTTAGAAATCTGCATCCAAAGTAAATGCGTTATCTGC---AGGACGTGACATCACACCCA 14659 Query 23216 TTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATAT 23275 | |||||||||| || ||||| |||| || ||||| ||||| || || | || |||| Sbjct 14658 TCCTTTGATATTCTCCTACACGCTTTTCAAAGAAATTAGTCTTGCCTTCCAGAGAGATAT 14599 Query 23276 TTTCCATAAAATCAAATGGATT 23297 | |||||||| ||||||||||| Sbjct 14598 TCTCCATAAAGTCAAATGGATT 14577 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||||| | ||| | || || |||||||| ||||||||||||||||| |||||||| || Sbjct 11702 TTCTTTAGAATCCTTAATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTT 11643 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861 || || |||||||| || ||||| ||||| | ||||| Sbjct 11642 CTCCATGGCAATCTGGAAGCCATAGAAACAGCGTGCTTC 11604 >seq22 Length=1337131 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || ||||| | ||| || || || || | ||||||||||| |||| || | Sbjct 639710 CTTCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 639769 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||||||||| || ||||| | || |||||||| || || || ||||| ||||| | Sbjct 639770 TGAGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACG 639829 Query 23651 CCAC 23654 | || Sbjct 639830 CAAC 639833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519555893478600