Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7643 136 3e-27 seq25499 89.7 4e-13 seq12261 82.4 5e-11 seq144 82.4 5e-11 >seq7643 Length=26413 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 24816 CATGCCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 24757 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| || ||||||||||| | ||||||||| | Sbjct 24756 AGAAAGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGG 24697 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | |||||||| || || || |||| | |||| | |||||||| || | Sbjct 24696 AGGAATGCCTTCCTTGTCTTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCT 24638 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || | ||||||||||||||| ||||| Sbjct 24637 CCACCTCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || || || || ||| |||||| ||||||||||| || Sbjct 24588 CATCCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 24529 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || ||||||||||| || |||||||||| | ||| || |||| Sbjct 24528 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGG 24469 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| ||||| ||||| | | ||||| || | || Sbjct 24468 AGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTC 24409 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || || | |||||||| ||||| ||||| Sbjct 24408 CACCTCTAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 24358 Score = 102 bits (112), Expect = 6e-17 Identities = 159/231 (69%), Gaps = 14/231 (6%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||||||| | || || ||||| || ||| ||||| ||||||||||| || Sbjct 25029 ATGCCTCCTCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCA 24970 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || ||||||||||| ||||||||||||| | ||| || |||| | Sbjct 24969 GAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCTGGA 24910 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || ||||| ||||| | | |||||||| || ||| Sbjct 24909 GG--------------ANTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCC 24864 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || || | ||||||||||||||| |||||| Sbjct 24863 ACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCATG 24813 >seq25499 Length=1430 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||| ||||| |||| || | ||| ||| || || ||||||||||| | |||||| Sbjct 198 TCCTTTGGGATGCTGTAGTCAGAGAGGATGCGATCATCTTCCAGCTGCTT-TCAGCAAAG 256 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| | ||| || |||| || | |||||||| ||| ||||| || | || Sbjct 257 ATCAGCCTCTGTTGGTCTGGCGGAATGCCTTCCTTATCCTGAATCTTGGCATTGAGATTT 316 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||||| ||| || || ||||| || || ||||| || || | ||| || | | Sbjct 317 TCAGTGGTGTCACCGGGTTTCAACTCCAGGGTGATGGTCTTCCCAGTTAAGGTATTGATG 376 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 377 AAGATCTGCAT 387 >seq12261 Length=14962 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || |||||||| || ||| |||||| ||||||||||| || | | Sbjct 13858 CCACCCCTCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAG 13799 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 || ||| | || |||||||||||||| |||||||||| | |||| Sbjct 13798 AGAGTGCGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGC 13751 >seq144 Length=1518462 Score = 82.4 bits (90), Expect = 5e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 44148 CCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||| ||||| || | |||| ||| | || ||||||||||| || |||||| Sbjct 572151 CCTTTCTGGATATTGTAGTCTGAGAGTGTGCGTCCATCTTCCAGCTGCTTTCCCGCAAAG 572210 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCT 44236 ||||||||||||||||| | ||| | |||| Sbjct 572211 ATCAAACGCTGCTGATCAGGAGGAATACCT 572240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358689984066183