Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7643 109 5e-19 >seq7643 Length=26413 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| ||||||||| ||||| ||||| || |||||||| Sbjct 24803 AGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGG 24744 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || |||| | ||| || || | |||| || ||| Sbjct 24743 CCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCC 24684 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGT 41823 ||||| |||||| |||| ||| || | |||| || | ||||||||||| || Sbjct 24683 TTGTCTTGGATTTTG-GCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 24625 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || | ||||| ||||| |||||||| Sbjct 24624 GATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 14/219 (6%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| |||||||| ||||| ||||| ||||||||||| Sbjct 25017 AGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 24958 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||||||||| || ||||| | ||||||||| | ||| | | Sbjct 24957 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCTGGAGGANTG--GATC 24900 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||| || | | || |||| | ||||| || | ||||||||||| || Sbjct 24899 TTGGCCTTCACATT----CTCAATG--------GTGTCACTGGGCTCCACCTCCAGGGTG 24852 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || |||| ||||| ||||| ||||||||| Sbjct 24851 ATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCATG 24813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460591169458800