Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq139421 89.7 4e-13 >seq139421 Length=9021 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| |||||||||| || | | || ||||||||| || ||| |||||| | || Sbjct 4695 AATGGCTTTACCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGTGAACTCTC 4636 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || | || ||| | || || || ||||| || || || || |||||||| ||| | Sbjct 4635 TTGTCAGTTGTATCAGCGTTCTGGAGACATGGGACTGGGAGTTCCTTTCAACATAGCTAG 4576 Query 19091 ATATGCACTTCTTACCTACATAG-TAGCGCATGTTACAGGACTTAA 19135 || |||||||||| |||| | | || ||||||||||| || || Sbjct 4575 TTACTCACTTCTTAC-TACAATGATTGCCCATGTTACAGGCCTAAA 4531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395200233296400