Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq139421 118 8e-22 >seq139421 Length=9021 Score = 118 bits (130), Expect = 8e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||||| |||||||| ||| || ||||| |||||| || ||| |||| | || Sbjct 4695 AATGGCTTTACCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGTGAACTCTC 4636 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| ||||||| || || | || ||||||||||| ||||||||||| || || || Sbjct 4635 TTGTCAGTTGTATCAGCGTTCTGGAGACATGGGACTGGGAGTTCCTTTCAACATAGCTAG 4576 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| | || ||||| |||||||| |||||||||| Sbjct 4575 TTACTCACTTCTTACTACAATGATTGCCCATGTTACAG 4538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394883680584400