Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq24600 82.4 6e-11 >seq24600 Length=2898 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 20053 ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTT 20112 |||||||||||| ||||| ||| | || | |||||| ||||| || | |||||| || Sbjct 510 ATCTTCCAATTGCTTGCCGGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTT 569 Query 20113 GTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAAT 20172 ||| ||||| ||||| | ||| | || | || ||| |||| |||||| Sbjct 570 GTCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGGGTAAT 629 Query 20173 GGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212 ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 630 GGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATCTTT 669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415067081501520