Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq236318 96.9 9e-15 >seq236318 Length=20466 Score = 96.9 bits (106), Expect = 9e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| | | |||||||||| |||||||| || ||||||||||| | ||| || Sbjct 6118 GAACGTGTAGTAGCATTTGCTGCAGTTGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCA 6177 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || |||||||| || ||||| | | ||||| || || || ||||| |||||| | ||| Sbjct 6178 ATATTTTGGCTGAAGAAACGAGGTCTAATGCCTGGACTTACTTTTTCTAATGAGCTGATT 6237 Query 22609 AGCCGAGATGAGG 22621 || ||||||||| Sbjct 6238 AGTAGAGATGAGG 6250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288592827225440