Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21]
883,920 sequences; 1,404,220,341 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq311453 105 6e-18
>seq311453
Length=2514
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
||||| || ||||| ||||| |||| || | ||| ||||| ||||||||||||||||||
Sbjct 236 TCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCTTTG 295
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| ||||| || | | ||||| |||||| ||| ||| || |||| ||| |
Sbjct 296 TCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATG 355
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||||| || |||| || || ||||| |||||||||
Sbjct 356 GTTTTTCCAGTCAAGGTCTTGACAAAGATCTGCATG 391
Score = 89.7 bits (98), Expect = 4e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
|||||| || ||||| ||||| |||| || | ||| ||||| |||||||||||||| ||
Sbjct 7 ATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTT 66
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||||| || | | ||||| |||||| ||| || || || | || |
Sbjct 67 GTCCTGGATCTTGGCCTTGACGTTTTCAATGGTGTCACTGGGCTCCACCTCAAGTGTTAT 126
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||||| ||||||| || || ||||| || ||||||
Sbjct 127 GGTTTTTCCGGTCAAGGTCTTGACAAAGATTTGCATG 163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415608386639040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |