Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq139421 91.5 1e-13 >seq139421 Length=9021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||||||| |||| ||| ||| | || || || || || ||||| |||||| Sbjct 4534 AGGCCTGTAACATGGGCAATCATTGTAGTAAGAAGTGAGTAACTAGCTATGTTGAAAGGA 4593 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC 20349 ||||||| ||||||||||| || | |||||||| |||||| || || ||||| Sbjct 4594 ACTCCCAGTCCCATGTCTCCAGAACGCTGATACAACTGACAAGAGAGTTCACC 4646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 436496071932800