Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21]
883,920 sequences; 1,404,220,341 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq311453 95.1 9e-15
seq24600 87.8 1e-12
>seq311453
Length=2514
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || ||||| |||||||| || |||| | | | ||||| |||||
Sbjct 415 ATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAATTG 474
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| ||||| | |||| | ||| |||||| || || ||||||||||| || ||
Sbjct 475 CTTCCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGGATCTT 534
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || |||| ||| |||||||| || ||
Sbjct 535 GGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTTTTCCCGGT 594
Query 15153 CAGAGTTTTTACAAAAATTTGCATATT 15179
|| || || ||||| || ||||| ||
Sbjct 595 CAAGGTCTTCACAAAGATCTGCATTTT 621
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || || || || |||||||| || ||| | | ||||||| | |||
Sbjct 188 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCCAGCTGT 247
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|||||||| | |||| | ||| |||||| ||||| ||||| ||||| || |||
Sbjct 248 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGGATCTTG 307
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| |||| || || || || ||| || || | ||| |||||||| || |||
Sbjct 308 GCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTTTTTCCAGTC 367
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
| || || ||||| || |||||
Sbjct 368 AAGGTCTTGACAAAGATCTGCAT 390
>seq24600
Length=2898
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || || || |||||||| || ||| | | | ||||| |||||
Sbjct 462 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAATTG 521
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||| || | ||||| | ||| || || ||||| ||||||||||| |||||
Sbjct 522 CTTGCCGGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATTTT 581
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || || | ||||||||| || || ||
Sbjct 582 GGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGGGTAATGGTCTTGCCAGT 641
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
|| || || ||||| || ||||| |||
Sbjct 642 CAAGGTCTTCACAAAGATCTGCATCTTT 669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353541896397200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |