Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq39449 109 5e-19 >seq39449 Length=2664 Score = 109 bits (120), Expect = 5e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||||||||||| |||||||||||||||||||||| |||||| || | ||||| Sbjct 1373 TACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTG 1432 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || | |||||||| |||||||||||||||||| ||| ||| || || Sbjct 1433 CTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGTGTCCCCGTCTC 1482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470246991660800