Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq133452 86.0 8e-12 >seq133452 Length=4818 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| ||||| | | |||||||||| ||||| || || || ||||| Sbjct 1690 TAGATGTTGCTGGTGTAGGGCTCCACGGACTCATTGTTCCCCAAAATCTGAGCCGTGGAA 1631 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||||| || |||| || ||||| || Sbjct 1630 GCTGTGGGCATCGGGGCCACCAGGAGGCTATT 1599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606728558947200