Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq85828 122 1e-22 >seq85828 Length=2831 Score = 122 bits (134), Expect = 1e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| ||||| | |||||| | ||| |||| |||||| || || ||||| ||||| Sbjct 451 CCAGCCGTAGAAGTGCATACTGGTCAGCTTGCCATAGTTGGGCTCCGCAATGTGGATGTT 392 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTT 204036 ||||||||||| ||||||||||| | | ||| || || ||||| || | |||||||| Sbjct 391 GAGAGACTGGCTCTGGTCGATGAAGGCCCCCCTGTCAGCTGCCATCTTCAGGATGGTCTT 332 Query 204037 CTGCGAAATCTCCCACACCGTCTTG 204061 |||||| |||||||||||||||||| Sbjct 331 CTGCGAGATCTCCCACACCGTCTTG 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786369530195200