Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21]
883,920 sequences; 1,404,220,341 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq436380 87.8 2e-12
>seq436380
Length=8816
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 21121 TTCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACT 21180
|| ||| || ||||| || | || |||||| | ||| | |||||| |||| |||| ||
Sbjct 7226 TTGTAGTATATGGGGACCAACTTGTGATGGCCTTGATCGTATTGTTGAGCGTTGTGGCCT 7285
Query 21181 GCCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGT 21240
||||| ||||| || || || ||| | | |||||||||||||| || || | || |
Sbjct 7286 ACCAGAACTTCAGGTTGGGGATTGGATGTTGTTTGAAAACATGGGAGCCTATA-CTGTGG 7344
Query 21241 CAG-CTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTAT 21291
||| | |||| ||||| || || || | | |||| || |||||||| ||
Sbjct 7345 CAGCCGCTTCTACCTTCAATGGATTTCAGAGGCCAACAATACACTATGTAAT 7396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458423884665600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |