Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq139421 95.1 1e-14 >seq139421 Length=9021 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCAT-GTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 ||| ||||| || || ||||| | ||| |||| | || || ||||| || |||||||||| Sbjct 4530 CTTTAGGCCTGTAACATGGGCAATCATTGTAG-TAAGAAGTGAGTAACTAGCTATGTTGA 4588 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGT 147100 | || || ||||| |||||||| || || | ||| |||| ||| || ||||| || || | Sbjct 4589 AAGGAACTCCCAGTCCCATGTCTCCAGAACGCTGATACAACTGACAAGAGAGTTCACCAT 4648 Query 147101 CGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | |||||||||||| || ||||| || || | ||||| || Sbjct 4649 TTAAAATGTAAAACTGGCAGAGAGCATGGCATGGAGGTAAAGCCATTGC 4697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577041041088000