Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq39449 86.0 8e-12 >seq39449 Length=2664 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 |||||| || |||||||| | ||| || ||||| | ||| | ||| |||||||| Sbjct 1357 CTCATCATTGCTGGTGTACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCC 1416 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 || ||||| || || ||| ||| || | |||||||| |||||||| || ||||| Sbjct 1417 CAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGTGTCCC 1476 Query 118859 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 ||||||||| || |||| | || || | ||||| Sbjct 1477 CGTCTCCGTCTGAGACTCAATGATGGCGTACCAGA 1511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611602109475200