Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq321951 89.7 6e-13 seq39449 89.7 6e-13 >seq321951 Length=5427 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 19250 TCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTC 19309 || ||||| ||||| || |||||||||||||||||||| |||||||| || || || Sbjct 1940 TCCAGCTGCTTCCTCCTGTGCATGAAGGATGACAGCATTGAAGGCATCTATGACACACTG 1881 Query 19310 AAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||| | ||||| | ||||||||||| | ||||| |||||| Sbjct 1880 AAGCACTGCGCACTCATCTCCAAGTCCGCGGGGGGAATCGGG 1839 >seq39449 Length=2664 Score = 89.7 bits (98), Expect = 6e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 79127 ACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 ||||||||||||| | ||||| ||||||||||||| ||| |||| |||||||||| || Sbjct 1404 ACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCA 1463 Query 79187 TGTACGGCGTCCCGGTCTC 79205 |||| || ||||| ||||| Sbjct 1464 TGTAGGGTGTCCCCGTCTC 1482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542464149484800