Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq864359 82.4 5e-11 >seq864359 Length=989 Score = 82.4 bits (90), Expect = 5e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 ||||||| ||||||||||| || || || ||| | || || | |||||| || ||||| | Sbjct 579 CCTTTTGGATGTTATAATCAGACAGAGTACGCCCATCCTCCAATTGTTTGCCAGCAAAAA 638 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCC 34604 |||||||||||||||| || || | ||| Sbjct 639 TTAAACGCTGTTGGTCAGGAGGAATTCC 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 311339088833360