Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq190528 95.1 1e-14 >seq190528 Length=17552 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 ||||| || ||||| |||||||| || ||||| ||||| | ||||| || |||||||| Sbjct 15898 GTTGTGGAAGAGCTGTTCCGAGACGGAGTAAATTGGGGAAGGATTGTGGCATTCTTTGAA 15839 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 |||||||| | ||||||||||||| |||| | | | || | | || || |||| Sbjct 15838 TTTGGTGGCATGCTGTGTGTGGAAAGTGTCAGTCGGGAGATGTCACCTCTTGTGGACAGT 15779 Query 3365 ATTGCCGCGTGGATGACAGA 3384 ||||| | |||||||| || Sbjct 15778 ATTGCTGAATGGATGACTGA 15759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410011734690880