Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21]
883,920 sequences; 1,404,220,341 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq311453 95.1 1e-14
seq24600 87.8 1e-12
>seq311453
Length=2514
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
|||||||| || ||||| || || |||||||| |||||||| ||| | || ||| |||
Sbjct 621 AAAATGCAGATCTTTGTGAAGACCTTGACCGGGAAAACCATCACCCTAGAGGTGGAGCCC 562
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
|| || | | | | || || || || ||||| |||||| | || |||
Sbjct 561 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGAC 502
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|| || ||||| || | ||| || || |||||||||||| ||| | | || ||
Sbjct 501 CAGCAGAGGCTGATCTTTGCTGGGAAGCAATTGGAAGATGGCCGCACTCTCTCAGACTAC 442
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| || ||||| ||||| || || ||| | || |||||||| | |||||||
Sbjct 441 AACATCCAAAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGCA 390
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || |||||||| || ||||| || |||||||| ||| |||| |||||||||
Sbjct 390 ATGCAGATCTTTGTCAAGACCTTGACTGGAAAAACCATCACCCTGGAGGTGGAACCCAGT 331
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | || || || || |||||||||||| |||| ||| ||
Sbjct 330 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCCGACCAG 271
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGA 111254
|| ||||| || | ||| |||||||| |||||||
Sbjct 270 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGA 236
>seq24600
Length=2898
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||| ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||| ||
Sbjct 669 AAAGATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTACCCTGGAGGTGGAGCC 610
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
|| || | ||| | || || ||||| ||||| |||||| |||| ||
Sbjct 609 AAGTGACACCATTGAGAATGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCTCCTGA 550
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275
||| || ||| | || | ||| ||||| |||||||||||| || | | || ||
Sbjct 549 TCAGCAGAGGTTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCCTCTCTGACTA 490
Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || || || || || || || ||| | || |||||||| | |||||
Sbjct 489 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417267122849920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |