Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq19887 129 5e-25 >seq19887 Length=6038298 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 ||||||||||||||||||| || || ||||| ||||| ||| ||| |||| ||| Sbjct 4354370 TAATGGCTTTGCCTCCATGCCACGCCCTTTGCCAGTTTTATGTTCTAAATGGTGAACTGT 4354311 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | || || ||||||| |||| | || |||||||| || || ||||||||||| || | Sbjct 4354310 CATGCCAGTTGTATCAGAGATCTGGAGACATGGGACTAGGGGTGCCTTTCAATATCGCCA 4354251 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||| | ||||| || ||||||||||| ||||| |||| Sbjct 4354250 GTTATTCACTGCTCACATATATGATTGCCCATGTCACAG 4354212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399087165945280