Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq19887 86.0 4e-12 >seq19887 Length=6038298 Score = 86.0 bits (94), Expect = 4e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 25766 CTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTC 25825 |||| |||| || |||| || || || || | ||||||||||| || || || |||| Sbjct 4360250 CTGCATTCATATCTTTGTATTCAGCCCCAAAGTGTCTCCACTGGAAACCATATACTGGTC 4360309 Query 25826 CTAGGTCTCCATCTTCCCTGTG-CTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCA 25884 | | || || || || || | || ||| | | |||||||| ||||| | || ||| Sbjct 4360310 CCAAATCCCCTTCCTCTCTCTTACTGAAACCTTGT-TTATCCAAGAAGTCACGTGATCCA 4360368 Query 25885 TTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||| ||||| ||||| || || || | ||||||||||| | ||||| || || Sbjct 4360369 TTGGCATCCCAAATCTTCACTCCTTTTGCAGAGAGCTCTTTAGCATTTGTTGAACC 4360424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340055089420992