Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2897 82.4 6e-11 >seq2897 Length=11696529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/89 (84%), Gaps = 8/89 (9%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CT--GAGTAAGATCTA 115581 || |||| ||| |||||||||||||||| ||||||||||||| || |||| |||| | Sbjct 4084694 TGGCATGAATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGGCTTGGAGT--GATCAA 4084637 Query 115582 AGGAACCAAAACTGATATATTGAGCCATT 115610 |||||||| ||||||| || ||||||||| Sbjct 4084636 AGGAACCATAACTGATTTAATGAGCCATT 4084608 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/89 (84%), Gaps = 8/89 (9%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CT--GAGTAAGATCTA 114384 || |||| ||| |||||||||||||||| ||||||||||||| || |||| |||| | Sbjct 4084694 TGGCATGAATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGGCTTGGAGT--GATCAA 4084637 Query 114385 AGGAACCAAAACTGATATATTGAGCCATT 114413 |||||||| ||||||| || ||||||||| Sbjct 4084636 AGGAACCATAACTGATTTAATGAGCCATT 4084608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396966080603008