Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq382 123 4e-23 >seq382 Length=2585615 Score = 123 bits (136), Expect = 4e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 9736 GTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAG 9795 || ||||| |||| |||||| ||| |||| || || || | || || || | || ||| Sbjct 1944975 GTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCACCTGCTTAAGGATGTCACAG 1944916 Query 9796 ACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCA 9855 || | ||| || ||||| |||||||| ||||| |||||||||||||| || || |||||| Sbjct 1944915 ACTCGGTTATGCTCTCTGAGCCATATTGTGGCATACATCATTAAACCTGGGACCAAACCA 1944856 Query 9856 AACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATA 9915 ||||| || | || || | ||| ||||| | || || | | || | || | ||| Sbjct 1944855 AACACCTCCTGGCCTACAGAAAATCGCAGGTGCTCAGGAATATGAGGAGGGTAGATCATT 1944796 Query 9916 TGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCTG 9968 | | || || || || || ||||| || |||||||| || | ||| | ||| Sbjct 1944795 TCTGCTTGTGTGTCCTTCACAGTGGGAGGGTACATTTCTCCATTAATCATCTG 1944743 Score = 113 bits (124), Expect = 7e-20 Identities = 194/282 (69%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 ||||| ||||||||||| || ||||| || | | || || || | || || Sbjct 1947335 GGACAACCCTTCACATTATTGCAGATGAGCTTTTGTAGCGAGGCAGTATTGATTATTTCA 1947276 Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013 || || || | || || |||||||| || ||||||||| || || || || | || Sbjct 1947275 AAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTGAGGAGAACAAATAGCATTT 1947216 Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 |||| || |||||||| || || || || || || || | ||| ||||||| || ||| Sbjct 1947215 CCCATAAGGCCTTTCAAAGAGAATGGTGCGCCAAGTTCCACCATGGTCTCACCAAAAATG 1947156 Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133 ||||| ||||| || | || || | | ||||| ||| || || | ||| || | ||| Sbjct 1947155 GCACCAGGACGAGGCCTCTCTACTAGAAGGCCAGGGTACAGCTCCATAGCATCAATGTCT 1947096 Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 ||||| || |||| || || || || || || || || ||| Sbjct 1947095 CCATAAAGCTCTTCTAATTCAGCTGCCATTTCTTTTTCTCCT 1947054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723547936473600