Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3620 96.9 6e-15 >seq3620 Length=164711 Score = 96.9 bits (106), Expect = 6e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || |||||| || | |||||| | ||||||| |||||| || || || | Sbjct 102985 CCTGCTTCCACCCATAGAAATGCATGCTGGTGAGTTTGCCATAGTTGGGCTCTGCAATAT 103044 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||||| |||||||| || |||||||||| |||| | || || ||||| |||| Sbjct 103045 GGATGTTCAAGGACTGGCTCTGATCGATGAAAG-CGCCTCTGTCAGCTGCCATTTTGAGG 103103 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||||||||| || || ||||| || ||||| Sbjct 103104 ATGGTCTTCTGGGAGATTTCCCAGACTGTCTT 103135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794957365386240