Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7403 100 8e-16 seq792 100 8e-16 >seq7403 Length=743988 Score = 100 bits (110), Expect = 8e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 302619 TGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTC 302678 ||| || || ||||||||||| ||||| |||| |||||||| || |||||||| | ||| Sbjct 431025 TGTCTTGACGGCTGTATCAATGAGACCCTCACGCCCACCCATGGCGTGGAAGAAGAACTC 431084 Query 302679 TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 ||| || || | | |||| |||| ||||| || || ||| ||| | Sbjct 431085 GGTGGGTGTCAGGCCAGCCAGGTAGGAATTCTCCACGAAGCCCCGGCTCTCAGGCCCGTA 431144 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | || || ||||| || | || || |||| ||||||| ||||| || Sbjct 431145 GTCGTCCTTGATGAAATGGGGCAGCGTGCGGTGCTTGAAGCCAAATGGGATCCGCTTCCC 431204 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 431205 CTCCACGTTCTGCTGCCCCA 431224 >seq792 Length=1052620 Score = 100 bits (110), Expect = 8e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 302619 TGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTC 302678 ||| || || ||||||||||| ||||| |||| |||||||| || |||||||| | ||| Sbjct 938441 TGTCTTGACGGCTGTATCAATGAGACCCTCACGCCCACCCATGGCGTGGAAGAAGAACTC 938382 Query 302679 TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 ||| || || | | |||| |||| ||||| || || ||| ||| | Sbjct 938381 GGTGGGTGTCAGGCCAGCCAGGTAGGAATTCTCCACGAAGCCCCGGCTCTCAGGCCCGTA 938322 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | || || ||||| || | || || |||| ||||||| ||||| || Sbjct 938321 GTCGTCCTTGATGAAATGGGGCAGCGTGCGGTGCTTGAAGCCAAATGGGATCCGCTTCCC 938262 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 938261 CTCCACGTTCTGCTGCCCCA 938242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471442257075648