Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq1603 84.2 2e-11 >seq1603 Length=1205265 Score = 84.2 bits (92), Expect = 2e-11 Identities = 95/126 (75%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 146449 GACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCT-CTACC 146507 |||||| ||||| || || ||| ||||||||||||||||||| || || || | || Sbjct 270136 GACCATTATTAATTTGGCTCAGAATTTTGTGGGCAGCAATAACCTCAATCTGCTACAGCC 270077 Query 146508 AGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATAT 146567 | |||||| ||||| || ||| || | || ||||| ||| |||| || || |||| || Sbjct 270076 CGTTGGGCAGTTCGGTACCAGGCTGCACGGTGGGAAAGACTCTGCCAGCCCTCGATACAT 270017 Query 146568 TTTCAC 146573 ||||| Sbjct 270016 CTTCAC 270011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521415839454720