Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3895 87.8 4e-12 >seq3895 Length=4157194 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || || |||||| || ||||| || ||||| |||||| |||| |||||| Sbjct 2197182 AGAGTGGTTGCCTTTGCTGCAGTGGAAGGAATCTTCTTCTCAGGTTCTTTTGCTGCTATA 2197241 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCAT 131973 |||||||| |||||| | || | ||||||||||| |||| |||||| || |||| Sbjct 2197242 TTTTGGCTGAAGAAGAGGGGTCTTATGCCTGGACTGACATTCTCCAATGAACTCAT 2197297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186510138999744