Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4337 86.0 5e-12 >seq4337 Length=10356891 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || ||||| || || || |||| || | || ||| | | ||| | |||||| || || Sbjct 7180878 TTGAGCTCTCTACTAAGCACTATATTAATTCTATCTTTTAAAGGGCGATTCTTCTCAGGA 7180937 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCTCTGT 114395 || |||||||||||| | ||||||||||||| ||| ||||| |||||| ||| Sbjct 7180938 ATCGAGAACCAAGTCCTCCTACCCATTATCAACACATTCTGTTTACCTGTGT 7180989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406064672930944