Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24]
19,904 sequences; 2,202,483,752 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq4256 89.7 5e-13
seq3273 84.2 2e-11
>seq4256
Length=2845976
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||| ||||| || | ||| |||||||| || | ||| ||||||||||||| || ||
Sbjct 147939 TCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCTTCTTC 147998
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| |||||| || | ||||| || || || ||||| || || || || || ||||| ||
Sbjct 147999 AACCAAAAGATAGATGCAAAGGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCAAAAGCT 148058
Query 23653 ACAAGACGT 23661
|| | ||||
Sbjct 148059 ACTACACGT 148067
>seq3273
Length=3379311
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
|||||||||| |||| | ||||| || ||||| ||||||||| ||| |||||||||||
Sbjct 3147102 GAACTCCTGAGCTCAAGCGATCCGCCGGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGC 3147043
Query 8597 ATGAGCCACCGCGCCTGGC 8615
|| ||||||||||| |||
Sbjct 3147042 GTGCGCCACCGCGCCCGGC 3147024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521358253785600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |