Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq208 111 2e-19 >seq208 Length=2424200 Score = 111 bits (122), Expect = 2e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||| ||||| ||||||||||| | ||| |||||| ||||| ||||| Sbjct 1738290 TCATCTCTGCTGATCAGTTCATTGGAAAAAGTAAGCCCAGGCATTAACCCTCGCTTCTTC 1738231 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 | ||| || || | ||||| || || ||||||||||| || || |||| ||| || ||| Sbjct 1738230 AGCCAAAAGATAGACGCAAAAGAACCGGAAAAGAATATTCCTTCCACAGCTGCGAAGGCG 1738171 Query 16346 ATTAATCGTTC 16356 | || |||||| Sbjct 1738170 ACTACTCGTTC 1738160 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| |||||||| |||||||||||||||||||| || ||||| || ||||| ||||| Sbjct 1737124 ATATATGTATCAATAAGTAAACTGTACATTTCTGAATGGATGTTTTCCATGGCGATCTGG 1737065 Query 16532 AATCCATAGAAGCATCGAGCCTC 16554 || |||||||| || ||||| || Sbjct 1737064 AAACCATAGAAACAGCGAGCTTC 1737042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511326507042680