Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq122 109 4e-19 seq174 105 5e-18 >seq122 Length=3335659 Score = 109 bits (120), Expect = 4e-19 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 4292 TTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAA 4351 ||||||| |||||||| || | ||||||||| ||||||||| || || |||||||||| Sbjct 1371636 TTAGTTCTTTGCTGAGTACTATGTTAATTCTGTTTTTTAAAGGGCGATTTTTCTCAGGAA 1371695 Query 4352 TTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394 | |||||||||||||| |||||||| || |||| || ||||| Sbjct 1371696 TGGAGAACCAAGTCTTCTTACCCATTATTACTACGTTTTGTTT 1371738 >seq174 Length=2756573 Score = 105 bits (116), Expect = 5e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||||||||| ||||| ||||| |||||||| || ||||| || || ||||||||||||| Sbjct 401090 CTTTATATTCAGCTCCAAAATGTCTCCACTGGAAGCCATAAACTGGGCCAAGATCTCCTT 401031 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| ||| || || | || ||||| ||| | ||| || || |||||||| | Sbjct 401030 CCTCTCTGGAATAGAATCCCTGCTTGTCTAAGAATTCACGAGAACCGTTGGCATCCCAGA 400971 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | || || || || |||||||| Sbjct 400970 TTTTAACTCCTTTAGCAGAAAGCTCTTT 400943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361190666603999