Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq174 96.9 2e-15 >seq174 Length=2756573 Score = 96.9 bits (106), Expect = 2e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 ||| |||||| ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct 401090 CTTTATATTCAGCTCCAAAATGTCTCCACTGGAAGCCATAAACTGGGCCAAGATCTCCTT 401031 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 | ||||| | |||| || |||| ||||| | | ||| || || |||||||| | Sbjct 401030 CCTCTCTGGAATAGAATCCCTGCTTGTCTAAGAATTCACGAGAACCGTTGGCATCCCAGA 400971 Query 97517 TGTGCACACCAGATGCTGCAAGCTCTTT 97544 | | || || || | ||||||||| Sbjct 400970 TTTTAACTCCTTTAGCAGAAAGCTCTTT 400943 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| |||||||| |||| | | || || || |||||||| ||||| || ||| Sbjct 403531 GTAACATGAGCGATCATTGAAGTGAGCAATGAGTAACTGGCAATGTTGAAAGGTACTCCT 403472 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 | |||||| || | || | |||||||||||||| || || | |||| | ||||| Sbjct 403471 AATCCCATGTCTCCAGAACGCTGATATAACTGACAAGACAGTTCACCATTTAAAACATAG 403412 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATT 97272 ||||| | | ||||||| || || || |||||| Sbjct 403411 AACTGGCAAAGAGCATGACACGGTGGTAAAGCCATT 403376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346725890813930