Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq63 479 2e-130 seq89 114 9e-21 >seq63 Length=4466547 Score = 479 bits (530), Expect = 2e-130 Identities = 782/1116 (70%), Gaps = 8/1116 (1%) Strand=Plus/Plus Query 107524 TCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACA 107583 ||||||||||| || |||| || ||||||| ||| || |||| |||| || || || Sbjct 2141599 TCAACTGTTCTCGGGTCACCCGGGGGGACCCGGATGCCGTGGAGGAGGCGCTGCTGAGCA 2141658 Query 107584 ACCTG-GAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACC 107642 ||| | ||||| || | | || |||| | | | | | ||||| ||||| || Sbjct 2141659 GGCTGCGCCGTGAA-AACAGGAGGGAGCCTTTAAAGGAGAAAGACTACCTGAACATGACG 2141717 Query 107643 AGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAA 107702 | ||||| || ||||| | ||||| ||||| | |||||| ||||| ||||| Sbjct 2141718 AAGGACTGCAGGCTGTTCAAAGAAAGCAGGAAATTCATCCCGTTCCCGCTGAGCAAAGAG 2141777 Query 107703 GAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAA 107762 ||| ||||||||||| || || || ||||||||||| || ||||| || | || || Sbjct 2141778 GAGGAGGACTTCCCCATCGCTTATTCCATGGTGGTCCACGAAAAGATAGAGATGTTCGAG 2141837 Query 107763 CGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAG 107822 |||| | | ||| | |||||||| |||||||| ||||| ||||||||||| |||| Sbjct 2141838 AGGCTCTTAAGGGCCATCTATGCCCCCCAGAACATCTACTGCGTCCACGTGGACAAGAAG 2141897 Query 107823 TC-CCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTT 107881 || |||| || ||| ||| || |||||| ||||||| |||||||| || ||||| Sbjct 2141898 TCACCCAAAGCCTTCCAA-GAAGCGGTCCAGGCCATCGCCTCCTGCTTTGAGAACGTCTT 2141956 Query 107882 CATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCT 107941 ||||| | || ||||||| || ||||| |||||| | |||||||| || || Sbjct 2141957 TCTGGCCTCCAGACAGGAGACGGTGGTGTACGCCTCTTGGTCCCGGGTGCAAGCGGATCT 2142016 Query 107942 GAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATG 108001 |||||| ||||||||| | || | |||| || || ||||||||| | |||||||| || Sbjct 2142017 GAACTGCATGGAAGACCTCCTTCGGAGCAACGTCCCCTGGAAGTACCTCCTGAATACCTG 2142076 Query 108002 CGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAA 108061 |||||| ||||| ||||| |||||||| || ||||| |||| || || | ||||| Sbjct 2142077 CGGGACCGACTTTCCCATCAAGACCAACGCAGAGATCGTCCAAAGGCTAAAACTTTTGAA 2142136 Query 108062 GGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATA 108121 ||| | ||||| |||||||| ||| || || || | || ||||||||||| Sbjct 2142137 GGGGAGGAACAACATGGAGTCAGAGAGGCCATCGACAGGGAAGCAGAACCGCTGGAAATA 2142196 Query 108122 CCGCTATGAGGTGACAGACACACTGTACCCTACCAGCA-AGATGAAGGACCCTCCCCCTG 108180 | | | || ||||| || | || || | | || ||| |||| || || ||| Sbjct 2142197 TCACCACGACGTGACGGATTCCGTGGTCCAAAGCGCCACAGA-GAAGAGGCCCCCACCTC 2142255 Query 108181 ATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAAC 108240 | | | ||||||||||| ||||| ||||| | |||| | | | | || ||||||| Sbjct 2142256 AGAGCTCCCCCATGTTCACCGGGAACGCCTACATCGTGGTCACCAGGGAGTTCGTCCAAC 2142315 Query 108241 ATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCC 108300 || | || || |||| | | | || || | || ||| ||||||||| || || | Sbjct 2142316 ATCTTTTCGAAGACCCGACAGCAAAACAGCTCCTGGAGTGGTGCAAAGACACTTACAGTC 2142375 Query 108301 CCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGA-TGCCTGGCTCTGTTCCT 108359 | || |||||||| ||||| || | || || | | | ||| | || || || || ||| Sbjct 2142376 CGGATGAACACCTGTGGGCTACTTTACATCG-GATGCCCGGAGTTCCAGGATCAGTCCCT 2142434 Query 108360 AGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAG 108419 | | |||| | | || || ||||||||| ||||| |||||| | || |||||| Sbjct 2142435 TTCAATGCCAAATTTGACCTCACAGACATGAACGCCATTGCCAGGTTGGTGAAGTGGGTT 2142494 Query 108420 TACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGG 108479 ||| ||| ||||| ||||||| |||||| || ||| | |||||| | || || | | Sbjct 2142495 TACAGCGAAGGAGACGTCAGCAAGGGGGCCCCGTATCCCCCCTGCACGGGGGTCTCCCAG 2142554 Query 108480 AGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTC 108539 |||| ||||| | ||||||| |||||||| ||||||| ||| | || |||||| Sbjct 2142555 CGGGCGGTCTGCGTCTACGGGGTAGGGGACCTCCACTGGATGCTCGCTCAGCACCACCTC 2142614 Query 108540 TTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTAC 108599 || || |||||||| || || ||| || | |||| | | | |||| | |||||||| Sbjct 2142615 TTTGCTAACAAGTTCGATCCCCAGGTCGACAACAACGCCATCCTGTGCCTGGAAGAGTAT 2142674 Query 108600 CTACGTCATAAGGCCATCTATGGGACTGAACTTTGA 108635 || || || ||| | ||||| |||| || || ||| Sbjct 2142675 CTGCGCCACAAGTCAATCTACGGGAAGGACCTCTGA 2142710 >seq89 Length=3767728 Score = 114 bits (126), Expect = 9e-21 Identities = 182/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 || || |||||||| ||| || || ||||| || || || || || ||| | || ||| Sbjct 2534219 CTAAGCAAAGAAGAAGCAGAGTTTCCTATTGCATATTCAATTGTAGTTCATCAAAAAATT 2534160 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 || | |||| |||| || || | | ||||| |||||||| ||||| | || Sbjct 2534159 GACATGCTTGATAGGCTTTTGAGATCAATCTATGCTCCTCAGAATTATTACTGCATTCAT 2534100 Query 107811 GTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTC 107870 || ||| |||||||||||| |||| | || || || | |||| || || || Sbjct 2534099 GTTGATAAGAAGTCCCCAGAATCTTTTCTGGCTGCAGTTAAAGGCATTGCCTCATGTTTT 2534040 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 |||||| ||||| |||||| |||||| || ||||||||||| ||| |||||| Sbjct 2534039 GACAATGTTTTCATTGCCAGTCAGTTGGAGAGTGTAGTTTATGCCTCATGGAGCAGAGTA 2533980 Query 107931 CAAGCTGACCTGAACTGTATG 107951 || || ||||| ||||| ||| Sbjct 2533979 CAGGCGGACCTCAACTGCATG 2533959 Score = 98.7 bits (108), Expect = 7e-16 Identities = 197/287 (69%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 108273 GTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGT 108332 || ||||||| |||||||| || || || || ||| || | ||||| || ||||||| Sbjct 2533634 GTAGAATGGGCAAAAGACACATACAGTCCAGATGAATACTTATGGGCTACTATTCAGCGA 2533575 Query 108333 GCTCCGTGGA-TGCCTGGCTCTGTTCCTAGCCACCCC-AAGTATCACATCTCAGACATGA 108390 ||| || | | ||||| | || ||| |||| || ||| | |||| ||||||| Sbjct 2533574 ATTCC-TGAAGTCCCTGGTGCAGTCCCT-GCCAGTGAGAAATATGATGTCTCTGACATGA 2533517 Query 108391 CTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGC 108450 ||| | |||||| | || |||||||| || ||||||||||| | |||||| | Sbjct 2533516 ATGCTCTTGCCAGGTTTGTTAAGTGGCATTATTTTGAGGGAGATGTGTCAAAGGGGGCTC 2533457 Query 108451 CTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACC 108510 | || |||| ||| |||| | ||| | | | || | | || | || ||| Sbjct 2533456 CCTACCCACCTTGCAGTGGAGTTCATATCCGTTCAGTGTGTGTCTTTGGAGTGGGAGACT 2533397 Query 108511 TGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || ||||||| || | ||| || ||| |||| || |||||||||||| Sbjct 2533396 TGAACTGGATGCTGCGGAAGCACCACTTCTTTGCCAACAAGTTTGAC 2533350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348210442012026