Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq208 102 8e-17 seq49 89.7 5e-13 >seq208 Length=2424200 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| || || ||||| || ||||| || | || ||||| || ||||| || | Sbjct 1738292 CCTCATCTCTGCTGATCAGTTCATTGGAAAAAGTAAGCCCAGGCATTAACCCTCGCTTCT 1738233 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | |||||| || | || || || ||||||||||||||||| || || || || || | Sbjct 1738232 TCAGCCAAAAGATAGACGCAAAAGAACCGGAAAAGAATATTCCTTCCACAGCTGCGAAGG 1738173 Query 13802 CTATTAGTCGTTCTCC 13817 | | || ||||||||| Sbjct 1738172 CGACTACTCGTTCTCC 1738157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || ||||||||||||||||| || |||||||| || || |||||||| || || ||||| Sbjct 1737124 ATATATGTATCAATAAGTAAACTGTACATTTCTGAATGGATGTTTTCCATGGCGATCTGG 1737065 Query 13990 AAACCATAAAAACATCTAGCTTCTG 14014 |||||||| ||||| | |||||||| Sbjct 1737064 AAACCATAGAAACAGCGAGCTTCTG 1737040 >seq49 Length=4988178 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 |||||||| ||||||||||| || || || || | || ||||||| ||||| || || Sbjct 468619 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGACCCGGCATCAGTCCTCTCTTCTTG 468678 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 13803 | ||||||||| || || || | || || ||||| ||||| ||||| | ||||| || Sbjct 468679 AGCCAAAATATAGCTGCAAAAGCACCAGAGAAGAAAATTCCTTCAACCGAGGCAAAAGCA 468738 Query 13804 ATTAGTCGTTCTCC 13817 | |||| ||||| Sbjct 468739 ACCAGTCTCTCTCC 468752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478506548532360