Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq102 84.2 2e-11 >seq102 Length=3625303 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| ||| |||||| || | ||||| ||||| | ||||| | || |||| || Sbjct 3125443 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCTTCCAGCTGC 3125384 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAAC 43026 ||||||||||| |||| | ||| ||||| | || | ||||| || || ||| Sbjct 3125383 TTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTA 3125324 Query 43027 TCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTT 43086 | ||||| | ||| ||||| | | ||| || || | || || || || || || Sbjct 3125323 GCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTG 3125264 Query 43087 AGAGTTTTCACAAAAATTTGCATTTT 43112 || |||||||||||||| |||||||| Sbjct 3125263 AGGGTTTTCACAAAAATCTGCATTTT 3125238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381305695445442