Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq49 100 2e-16 seq208 96.9 3e-15 >seq49 Length=4988178 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 13166 TGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCT 13225 |||| | |||||||||| || || || || || || || || ||||||||||| || ||| Sbjct 468610 TGCATTACTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGACCCGGCATCAGTCCT 468669 Query 13226 CGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCT 13285 | || || | |||||||||||| ||||| | ||| || || || ||||||||||| | Sbjct 468670 CTCTTCTTGAGCCAAAATATAGCTGCAAAAGCACCAGAGAAGAAAATTCCTTCAACCGAG 468729 Query 13286 GCAAACGC 13293 ||||| || Sbjct 468730 GCAAAAGC 468737 >seq208 Length=2424200 Score = 96.9 bits (106), Expect = 3e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 ||||| ||||| || | ||| || |||||||||||||| || |||||||| || || ||| Sbjct 1737124 ATATATGTATCAATAAGTAAACTGTACATTTCTGAATGGATGTTTTCCATGGCGATCTGG 1737065 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 |||||||| ||||| | ||| |||| ||||| ||||| Sbjct 1737064 AAACCATAGAAACAGCGAGCTTCTGTCACCTGCACTTC 1737027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430910182030098