Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq102 91.5 1e-13 >seq102 Length=3625303 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| || | || || || | || |||||||| Sbjct 3125443 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA-AAGCGTACGGCCATCTTCCAGCTG 3125385 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | | || | | ||||||||| || | | |||||||||| ||||| Sbjct 3125384 CTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTT 3125325 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | | ||||| || | | |||| ||| | || ||||| || || || Sbjct 3125324 AGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGT 3125265 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| |||||||||||||||||||| Sbjct 3125264 GAGGGTTTTCACAAAAATCTGCAT 3125241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421180612647749