Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq7524 98.7 1e-15 seq235 98.7 1e-15 >seq7524 Length=1393 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| |||||| | ||||| || | ||| |||| |||||||| || |||||||| Sbjct 83 TAGGCTGCAAACATGTGAAAGGCATCCTCTTATATGGCCCTCCTGGCTGTGGTAAAACTC 142 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATG 164617 | ||||| | |||| |||| | || ||| || || || ||||| || || | Sbjct 143 TGATGGCCAGGCAGATTGG-CAAGATGTTGAATGCCCGAGAACCA--AAAATAGTGAACG 199 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 | |||||| | | ||||||||||| || |||||||| || || || | ||| | ||| Sbjct 200 GACCTGAAATCCTCAACAAATATGTTGGCGAGTCAGAGGCCAACATTCGCAAGCTCTTTG 259 Query 164678 AGGAGGCTGAAGAAGAACA 164696 || || ||||||||||| Sbjct 260 CAGATGCCGAAGAAGAACA 278 >seq235 Length=2175252 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| |||||| | ||||| || | ||| |||| |||||||| || |||||||| Sbjct 424060 TAGGCTGCAAACATGTGAAAGGCATCCTCTTATATGGCCCTCCTGGCTGTGGTAAAACTC 424001 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATG 164617 | ||||| | |||| |||| | || ||| || || || ||||| || || | Sbjct 424000 TGATGGCCAGGCAGATTGG-CAAGATGTTGAATGCCCGAGAACCA--AAAATAGTGAACG 423944 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 | |||||| | | ||||||||||| || |||||||| || || || | ||| | ||| Sbjct 423943 GACCTGAAATCCTCAACAAATATGTTGGCGAGTCAGAGGCCAACATTCGCAAGCTCTTTG 423884 Query 164678 AGGAGGCTGAAGAAGAACA 164696 || || ||||||||||| Sbjct 423883 CAGATGCCGAAGAAGAACA 423865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595769591948400