Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq182 123 4e-23 >seq182 Length=2638091 Score = 123 bits (136), Expect = 4e-23 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 8751 CAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGT 8810 |||| ||||| | || || || ||||| || |||||||| | || |||||||| | | Sbjct 1921364 CAAAGCCCACTTTGCCCCCAAATGTGCTTGGCTTCCAGTACTCGGGTGAGCAGATTGCAT 1921423 Query 8811 TCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGA 8870 | ||||||| || || || ||||| || || || ||||| | ||| | ||||| |||| Sbjct 1921424 TTCCCATGAGACCCTTCAGAGAAAATGGGGCTCCAAGCTCTATCATGGTTTCACCAAAGA 1921483 Query 8871 TGGCGTTGGGACGGGGCTTTTCCACCAAGAATC-CGGTGTACAACTCCACAGCCTCGATG 8929 |||| ||||| || ||||| || ||||| | | |||| ||||| ||| ||||| Sbjct 1921484 TGGCTCCAGGACGTGGTTTTTCTAC-AAGAAGGGCTGGATACAGCTCCATAGCATCGATA 1921542 Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976 ||||| || || | ||||| || || ||||| ||||||||||| Sbjct 1921543 TCTCCATAGAGCTCTTCAAGTTCCGCTGCCATTTCTTTTTCTCCTGT 1921589 Score = 104 bits (114), Expect = 3e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 || || ||||| || || ||| |||||||||||| ||| || |||| ||| || || Sbjct 1924466 GTTTGGAACAGCTGCTCATCATCCCATTCTGGATGCTCTGTCTTGAGAATATCACAGACC 1924525 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 | ||||||||| | ||||| | || || |||||||| | || || |||| |||||| Sbjct 1924526 CGGTTGTGTTCTCGAAGCCACAATGTGGCATACATCATCAATCCTGGAACCAAGCCAAAG 1924585 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 ||||||| || |||| | || | || || | ||| ||||||||||| | Sbjct 1924586 ACCTCTTGCCCTACAGAAAATTTCAGGTGCTCAGGGGTGTGGGGTGGATAGATCATTTCT 1924645 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCTG 9863 | || ||||| || | ||| |||||||| || || ||||| ||||| Sbjct 1924646 GCTTGAGTTTCTTTCACTGTGGGTGGATACATCTCTCCATCAATCATCTG 1924695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708403031156560