Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq49 102 1e-16 seq148 93.3 5e-14 >seq49 Length=4988178 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| ||||| ||||| ||||| || || || || ||||| || || | ||| || Sbjct 468619 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGACCCGGCATCAGTCCTCTCTTCTTG 468678 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 ||||||||||| | || || | ||||| ||||| |||||||| || | ||||| ||| Sbjct 468679 AGCCAAAATATAGCTGCAAAAGCACCAGAGAAGAAAATTCCTTCAACCGAGGCAAAAGCA 468738 Query 33448 ATAAGTCTCTCTCC 33461 | ||||||||||| Sbjct 468739 ACCAGTCTCTCTCC 468752 >seq148 Length=2989754 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| |||| ||| || ||||||||||| | || || || || |||||||| || || | Sbjct 2363381 CACTGAATACTTTCTTGGTTTCCTTGTGCAAGTTGGAGACTGCAATTCTGGCTGCCAGGA 2363322 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || | | || || || ||||| | ||||||||||||||||||| Sbjct 2363321 TGGCATAGTCTGGGTACTTGGTGGTCAGCGTCGCTGCGGTCTCGGCTGCCAGAGTGTCCA 2363262 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||||| || || || || | || | || || || || ||||| Sbjct 2363261 GCTCTACTGTAGTGACGCCGCTGTAAAGACCCTGGATCACTTTCAT 2363216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622840138736840