Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq49 87.8 5e-12 seq148 86.0 2e-11 >seq49 Length=4988178 Score = 87.8 bits (96), Expect = 5e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 |||| ||||| ||||||||| |||||||| ||||| || ||| || || ||||||| Sbjct 468739 TTGCTTTTGCCTCGGTTGAAGGAATTTTCTTCTCTGGTGCTTTTGCAGCTATATTTTGGC 468680 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 | || || | | | | ||||||||||| || || || ||||| | |||||| |||||| Sbjct 468679 TCAAGAAGAGAGGACTGATGCCGGGTCTTACTTTCTCCAATGAACTTATTAGCAGAGATG 468620 Query 22619 A 22619 | Sbjct 468619 A 468619 >seq148 Length=2989754 Score = 86.0 bits (94), Expect = 2e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || ||||| || ||||| ||| | || |||||||||| | | ||||| Sbjct 2376362 GCCCCGATGCCAACAGCTTCGACGGCACAAATCTTGGGCAACAACGAGTCCATTGAACCC 2376421 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 | || ||||| | || ||||||||||||| || ||||| |||| ||||| Sbjct 2376422 TACACCAGCAACATCTACACACGCCGGGTTCTCTCTGGAGAGTTTCAGGTAG 2376473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303124002451718