Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq102 172 1e-37 seq32 84.2 4e-11 >seq102 Length=3625303 Score = 172 bits (190), Expect = 1e-37 Identities = 172/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || ||||| || || | Sbjct 3125458 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGG 3125399 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || || || || |||||||||||| Sbjct 3125398 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCC 3125339 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || |||||||| ||| |||||||| || || || ||||||||| Sbjct 3125338 TTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTG 3125279 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466 ||||| || || |||||||| || || || ||||||||| ||| Sbjct 3125278 ATGGTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCATTTTGC 3125236 Score = 172 bits (190), Expect = 1e-37 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| | || || | ||||||| || | ||| || |||||||| || |||||||| | Sbjct 3125931 TTTAAATACCACCCCTCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGT 3125872 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | |||||||| || | |||||||| | |||||| ||||| || || || || || |||| Sbjct 3125871 AGTCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGT 3125812 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||| ||||||||||| || || || |||||||| ||| |||||||| | Sbjct 3125811 CAGGAGGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTCG 3125752 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||||||||| || || || | |||||| || || |||||||| Sbjct 3125751 GCTCCACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 3125697 Score = 150 bits (166), Expect = 3e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || || ||||| || | Sbjct 3125686 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGG 3125627 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || ||||| || |||||||||||| Sbjct 3125626 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 3125567 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || |||||||| || |||||||| | || || |||| ||| Sbjct 3125566 TTGTCCTGGATTTTAGCCTTGACATTTTCAATGGTGTCACTCGGCTCCACCTCCAGAGTG 3125507 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || | |||||| || || |||||||| Sbjct 3125506 ATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 3125469 >seq32 Length=5936712 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 ||||| ||||| ||||| || ||||||||| |||||||||||| ||| | || || || Sbjct 2259444 CCTTCTTTGTCCTGAATTTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGGCTCCACCTC 2259386 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || ||||| | ||| || || || |||||||| Sbjct 2259385 AAGGGTGATGGTCTTGCCCGTCAAGGTTTTCACAAAGATCTGCAT 2259341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921464007670280